Working with remote data using DuckDB
The minimalist beauty of the canonical equation of adaptive dynamics
Non-dimensionalization of ecological models
A deeper dive into the SIR model
Why is there a limit to growth in the logistic model?
Automating adaptive dynamics even more
The many ways of finding R₀
Scale, productivity, biodiversity, and curve-fitting
Partitioning ecological network dissimilarity
The “long now” of ecology just got a whole lot shorter
Validation metrics for the prediction of species interactions
Expensive & Open Source Science
Disagreements about code style, and how to solve them
Quantifying species importance for network structure
Automating adaptive dynamics some more
Automating adaptive dynamics
Graduate classes in biological modeling are hard
Food web prediction is non-trivial
Food web prediction is trivial
My favorite model is wrong
The stories units tell
Population dynamics and functional programming
Ecological networks, minus the species
Programming languages are irrelevant
Meta-populations on a toroidal world
Reaction networks for disease dynamics
It's time to retire the iris dataset
SDM with bioclim in three lines of code
A recommender for species interactions
Against Notebooks
Should I optimize my code?
Data quality is a myth
Quantitative dissimilarity of ecological networks
Ecological networks, almost-p-hacking, and conformism
Training a neural network on the seeds dataset
Are there two schools of ecology?
The great european bunny extinction of the 1950s
Transgressive overyielding and coexistence
A successful failure at identifying camera traps pictures using deep learning
False negatives and the reproducibility crisis
Building your own data life cycle
What is the most uniquely biodiverse place in Canada?
Data analysis: content and style separation
Beware data science in ecology
The many flavors of (research) computing
Herd immunity: how vaccines work for all of us
Explaining algorithms is not easy
Picking the most efficient flower-picking route with simulated annealing
Measuring the modularity of ecological networks
Brain dump on drawing random networks — part 1
I am not competing against laptops when I teach.
The well-rounded biologist.
Data is not just data anymore
Three years of using Julia
The grammar of data
Diffential Equations with Julia, updated.
But why should we model things anyways?
When are networks worth it?
The value of getting nothing done.
Naive Bayesian Classification of parasite data
Notes on the Gillespie algorithm - part 2
Notes on the Gillespie algorithm - part 1
Live mathematical modeling
Fail, fail, fail. Then fail again.
"No true Scotsman" (and no true ecologist)
A biogeographic study of Paw Patrol
Solving differential equations for ecological problems.
Reproducing modelling papers is important and instructive.
Why I can't enjoy PhD Comics
How to ensure you have early career speakers at your next events.
Five tips to make better presentations
Hypotheses are over-rated. Don't let them ruin your writing.
Data training: community over institution
What I look for in a Software paper.
The most important scientific figure ever drawn.
Bipartite networks are not sampled well.
Is community ecology a thing?
Julia in ecology: why multiple dispatch is good
The futility of sharing ecological data
Responding to reviewers, part 2
Responding to reviewers, part 1
Science Bioblitz, data quality, and crowd-sourcing
We can't see the forest for the bird.
Two grants should be enough
When exactly is it citizen science?
In defense of over-simplified ecological models
Computational ecology: currencies for collaboration
The artist and the craftsman.
What is computational ecology?
Approximate Bayesian Computation and tiny data in ecology
Ecology's unhealthy obsession with patterns
Is ecology replicable?
Advanced research computing for ecology
Ecological modelling is world building